Plot the nucleotide proportion at both extremity of the sequences — plot_refseq_extremity

It is a useful function to check for the absence of unwanted patterns caused for example by Illumina adaptator or bad removal of primers.

If hill_scale is not null, Hill diversity number are used to represent the distribution of the diversity (equitability) along the sequences.

Usage

plot_refseq_extremity_pq(
  physeq,
  first_n = 10,
  last_n = 10,
  q = c(1, 2),
  min_width = 0
)

Arguments

physeq: (required) a phyloseq-class object obtained using the phyloseq package.
first_n: (int, default 10) The number of nucleotides to plot the 5' extremity.
last_n: (int, default 10) The number of nucleotides to plot the 3' extremity.
q: (vector) A vector defining the Hill number wanted. Set to NULL if you don't want to plot Hill diversity metrics. Hill numbers are more appropriate in DNA metabarcoding studies when q > 0 (Alberdi & Gilbert, 2019; Calderón-Sanou et al., 2019).
min_width: (int, default 0) Select only the sequences from physeq@refseq with using a minimum length threshold. If first_n is superior to the minimum length of the references sequences, you must use min_width to filter out the narrower sequences

Value

A list of 4 objects

p_start and p_last are the ggplot object representing respectively the start and the end of the sequences.
df_start and df_last are the data.frame corresponding to the ggplot object.

Author

Adrien Taudière

Examples

res1 <- plot_refseq_extremity_pq(data_fungi_mini)
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#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
names(res1)
#> [1] "plot_start" "plot_last"  "df_start"   "df_end"    
res1$plot_start
#> Warning: Removed 1508 rows containing missing values or values outside the scale range
#> (`geom_point()`).
#> Warning: Removed 754 rows containing missing values or values outside the scale range
#> (`geom_line()`).

res1$plot_last

# \donttest{
res2 <- plot_refseq_extremity_pq(data_fungi, first_n = 200, last_n = 100)
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
#> ! Entropy estimators can't apply to probability data.
#> → `estimator` forced to 'naive'.
#> ! The estimator can't be applied to non-integer values.
res2$plot_start
#> Warning: Removed 892 rows containing missing values or values outside the scale range
#> (`geom_point()`).
#> Warning: Removed 446 rows containing missing values or values outside the scale range
#> (`geom_line()`).

res2$plot_last


plot_refseq_extremity_pq(data_fungi,
  first_n = NULL,
  last_n = 200,
  min_width = 200,
  q = c(3)
)$plot_last
#> Cleaning suppress 0 taxa (  ) and 0 sample(s) (  ).
#> Number of non-matching ASV 0
#> Number of matching ASV 1420
#> Number of filtered-out ASV 0
#> Number of kept ASV 1420
#> Number of kept samples 185

# }